PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0119s0040.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 416aa MW: 45352.8 Da PI: 6.5767 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51.4 | 2.4e-16 | 206 | 259 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr rr+ +NRe+ArrsR+RK+a + Le+ v++L eN++L ++l++ ++k Kalax.0119s0040.3.p 206 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLT---NRLNDICQKF 259 689****************************************9...6666666654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-12 | 202 | 255 | No hit | No description |
SMART | SM00338 | 9.2E-17 | 204 | 268 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.415 | 206 | 269 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.1E-13 | 207 | 256 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.23E-12 | 208 | 257 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 211 | 226 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.2E-35 | 275 | 405 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MDRVFSVEGI ADHFWSSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA 60 SKLHDDEDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRAS TGKPQDSSTS 120 TDSGTKALNA SQVRSHVNKK VCVGSGSDSS KRKNKDGPLG NPTLPAKPSK HVVQVKSTTS 180 GSSRELSDDD ELEGVTEMTG DMDHTDAKRV RRMLSNRESA RRSRRRKQAH LTDLETQVAQ 240 LRVENSSLTN RLNDICQKFD EVSVDNRVLK ADVETLRAKV KMAEETVKRV TGQSPMFQTM 300 SETSTFNTQS YDGDNSDIST DAAVPIQDDR SDHIYQQHAS NPLTATPLHD PRVANSLSNN 360 SSTENACPNS SAAETITLSG NKTGRMSSMQ RVASLEHLQK RIRGNSSATQ CNGEQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 220 | 227 | RRSRRRKQ |
2 | 222 | 227 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006347748.1 | 1e-140 | PREDICTED: light-inducible protein CPRF2 | ||||
Swissprot | Q99090 | 1e-118 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A1S4CER8 | 1e-140 | A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like | ||||
STRING | PGSC0003DMT400050096 | 1e-140 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 5e-71 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0119s0040.3.p |
Publications ? help Back to Top | |||
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