PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0119s0040.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 417aa    MW: 45480.9 Da    PI: 6.5767
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0119s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.32.5e-16207260359
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                          + kr rr+ +NRe+ArrsR+RK+a +  Le+ v++L  eN++L    ++l++ ++k 
  Kalax.0119s0040.1.p 207 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLT---NRLNDICQKF 260
                          689****************************************9...6666666654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-12203256No hitNo description
SMARTSM003389.2E-17205269IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415207270IPR004827Basic-leucine zipper domain
PfamPF001702.1E-13208257IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.23E-12209258No hitNo description
PROSITE patternPS000360212227IPR004827Basic-leucine zipper domain
PfamPF124981.2E-35276406IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MDRVFSVEGI ADHFWSSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA  60
SKLHDDEDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRQA STGKPQDSST  120
STDSGTKALN ASQVRSHVNK KVCVGSGSDS SKRKNKDGPL GNPTLPAKPS KHVVQVKSTT  180
SGSSRELSDD DELEGVTEMT GDMDHTDAKR VRRMLSNRES ARRSRRRKQA HLTDLETQVA  240
QLRVENSSLT NRLNDICQKF DEVSVDNRVL KADVETLRAK VKMAEETVKR VTGQSPMFQT  300
MSETSTFNTQ SYDGDNSDIS TDAAVPIQDD RSDHIYQQHA SNPLTATPLH DPRVANSLSN  360
NSSTENACPN SSAAETITLS GNKTGRMSSM QRVASLEHLQ KRIRGNSSAT QCNGEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221228RRSRRRKQ
2223228SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229152.11e-138PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-116CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A1S4CER81e-138A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like
STRINGPGSC0003DMT4000500961e-138(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.23e-69bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]