PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0113s0026.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 262aa MW: 28352.3 Da PI: 4.4878 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6e-18 | 33 | 83 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa +l+g Kalax.0113s0026.1.p 33 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALICLKG 83 59*****998.**********9...336***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.11E-18 | 33 | 94 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.1E-28 | 34 | 93 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.75E-18 | 34 | 94 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.6E-33 | 34 | 98 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.8E-11 | 34 | 83 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.746 | 34 | 92 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.6E-9 | 35 | 46 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.6E-9 | 57 | 73 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0034605 | Biological Process | cellular response to heat | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MVKTVVKVEA ADRTTKRTMS SSASSSTTSA AGKKYKGVRM RSWGSWVSEI RAPNQKTRIW 60 LGSYSTAEAA ARAYDAALIC LKGSSATNLN FPLSSPHYLI PDTSTLMSPK SIQRVAAAAA 120 ANSYYVPDTT PATTNVSFFS PSSSSPLSSP SMSSDQFDDE SADVPLVAPS HDDQPLDTDY 180 GFRTNGVMST AAPCWFDHHF NTTNFDGSCF ESPKCADLQM FNTAADADAD AASLFNPPAF 240 MDYEQDYFYE EEVDIPLWSF C* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-14 | 30 | 93 | 1 | 64 | ATERF1 |
3gcc_A | 3e-14 | 30 | 93 | 1 | 64 | ATERF1 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00156 | DAP | Transfer from AT1G21910 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016755493.1 | 1e-44 | PREDICTED: ethylene-responsive transcription factor ERF014-like | ||||
TrEMBL | A0A1U8PYR2 | 2e-43 | A0A1U8PYR2_GOSHI; ethylene-responsive transcription factor ERF014-like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0113s0026.1.p |