PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0110s0079.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 604aa MW: 65212.5 Da PI: 7.6154 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.2 | 5.2e-31 | 343 | 401 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ Kalax.0110s0079.1.p 343 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 401 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-33 | 327 | 403 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.72E-28 | 335 | 403 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.895 | 337 | 403 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-37 | 342 | 402 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.8E-26 | 344 | 401 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 604 aa Download sequence Send to blast |
MDRGWGVTTV AEADRSVIPF FASKPSVINS FYSLKHSGGS SGSGMKIFPV SLSGSRERDM 60 PEGSGRRVVD EVDFFSGERE IMKAAAARDG ENSGVSVKEE VLHGEPILTK SDLNVNTRLD 120 LLTSNAGSDQ STVEDGRALD DKRTKTSQVS QMQLELGRLN AENQRLKEMF TQVSNNYQAL 180 QMHMIAFMQQ HQQQQLQAPV LESAQDHEMG GRKSEDKVVA APALPRQFLN LGPGSVSQEP 240 DELSNSSSGE RTHSGSQHNN NLEIASKRPR SDQENSRDGK GTDREDSPDS ETQGWSRNNK 300 AAKLGNNGNV VCEAKQVEQQ PTEATMRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP 360 CPRAYYRCTM AVGCPVRKQV QRCAEDTTIL ITTYEGNHNH PLPPAAVAMA STTSAAASML 420 LSGSMSSTDG LMNPNFLARA ILPCSSNIAT ISASAPFPTV TLDLTHSPNP LQLQRQQRQQ 480 LQQQPSFAMP AANSLPQIFG PALYNQSRFS GLQLSQDSNL ASKGLPLPVP IPPPSLPQGQ 540 HTSFADTVSA ATAAITNDPN FTAVIAAAIS SFISANNQRP NSDSSNPNTK STPATTQQHH 600 NQQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 8e-23 | 329 | 405 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021294776.1 | 0.0 | probable WRKY transcription factor 31 | ||||
Swissprot | Q9XEC3 | 1e-140 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A061GGS5 | 0.0 | A0A061GGS5_THECC; WRKY family transcription factor | ||||
STRING | EOY28756 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-120 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0110s0079.1.p |