PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.0104s0067.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 387aa MW: 42761 Da PI: 7.2656 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.9 | 3.6e-31 | 104 | 157 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrW+p+LH +Fv av++LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Kalax.0104s0067.2.p 104 PRLRWSPDLHMCFVLAVQRLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 157 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 8.7E-30 | 100 | 158 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 9.904 | 100 | 160 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.36E-13 | 102 | 158 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.5E-22 | 104 | 159 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.5E-7 | 105 | 156 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 387 aa Download sequence Send to blast |
MASSTEKPTE AAIEIISGDE SYTSSSSRGA KDHSTTYKSS PTVLDLNERA TGGVQEEDDN 60 GDYCDDDDNE EGNSTSGNNE DRGGREIRSN GMNTVRQYVR SKMPRLRWSP DLHMCFVLAV 120 QRLGGQERAT PKLVLQLMNV KGLSIAHVKS HLQMYRSKKL DESGQVLSHH QNAPYSHGKH 180 HHQMMEIMCR RGVHTSSHPY AHPHFKMDSS RSGTCSLNNH VEFPSFRQSL SSTRNKNWPV 240 GSHGRWSEDL GLAPGCAPDH EPRASDVSKH FAGPVRQSHF LEKRWTASGL GLNAAYDWDK 300 KHPSDDHQMM KLNSVLSLWN PQTSSTTWSP TTSPTLTTAC LRFKEAVSDS SSPTPNLQLS 360 LGHADENETK PSDDASQRHA KGSSSS* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 8e-17 | 105 | 159 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-17 | 105 | 159 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-17 | 105 | 159 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-17 | 105 | 159 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-16 | 105 | 159 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38300.1 | 1e-36 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.0104s0067.2.p |