PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0102s0094.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 266aa MW: 28992.3 Da PI: 4.6575 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.3e-18 | 131 | 182 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr ++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g Kalax.0102s0094.1.p 131 SSYRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAETAALAYDQAAFAIRG 182 67********.**********44465..************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 3.53E-22 | 131 | 191 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 8.23E-31 | 131 | 191 | No hit | No description |
Pfam | PF00847 | 1.4E-12 | 131 | 182 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.9E-30 | 132 | 191 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.4E-36 | 132 | 196 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.919 | 132 | 190 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.0E-13 | 133 | 144 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.0E-13 | 172 | 192 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence Send to blast |
MDSCCNLSPQ DPFQDVSSPF GFEYWESSLP IDMNPPPPPF TFLDSDEMHL LSSLLDLDSS 60 ASASSPSSVS NEPGCWIPDE REITSASKQG KSRKREGKGA TPAAKRENPA DECEEDTVNP 120 ASKQKLKSGK SSYRGVRKRP WGKFAAEIRD STRNGVRVWL GTFDSAETAA LAYDQAAFAI 180 RGSTAVLNFP EEIVKHSLEG MIRIGSDDCD DGCSPVLALK KKHSTKRRSM SSGKPVSKDE 240 EEESVVVVLQ DLGSEYLEEL LMSSM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 3e-27 | 133 | 190 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 8e-27 | 131 | 193 | 13 | 75 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Swissprot | A0A3Q7I5Y9 | 8e-54 | ERFC3_SOLLC; Ethylene-response factor C3 | ||||
STRING | PGSC0003DMT400026627 | 3e-52 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-48 | ethylene response factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0102s0094.1.p |
Publications ? help Back to Top | |||
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