PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0100s0041.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 308aa MW: 33485.5 Da PI: 9.1787

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0100s0041.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.6	2.7e-38	80	139	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+ lkcprC s+ntkfCyynnys sqPryfCk+CrryWt+GGalrnvPvGgg+r+nk+ s Kalax.0100s0041.1.p 80 ETVLKCPRCASMNTKFCYYNNYSHSQPRYFCKTCRRYWTQGGALRNVPVGGGCRRNKRYS 139 6779*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-32	63	137	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.3E-33	81	137	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.938	83	137	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	85	121	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
MIFSSMPPNY NLNPPSTCNH QQVNHQQLGS SAEGPHPQPP HTPMLPNSPP PQQPAIHYQG 60 TIRPGSMTDR ARMANMPIPE TVLKCPRCAS MNTKFCYYNN YSHSQPRYFC KTCRRYWTQG 120 GALRNVPVGG GCRRNKRYSS KVGGGGSSGT ARSKSPAHSG STPSNSIGYS SGDLIRHGSH 180 IHPQVSFMAP LNLHFSDYSA EDIGVSYPGM IPRVSSSADH FNLLTGNGNT ATSSSEIDPW 240 TFIHQHQRLA PVYHHPSSFG SNLEAPLTET PSLYGVEGHV NASQPTKHKL PCTADTQLDL 300 LKLEKGI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	7e-42	Dof family protein

Link Out ? help Back to Top
Phytozome	Kalax.0100s0041.1.p