PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0097s0078.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 355aa MW: 38170 Da PI: 8.7998 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.2 | 4.1e-39 | 41 | 102 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k+++++cprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn++sss Kalax.0097s0078.1.p 41 KDQIVNCPRCNSVNTKFCYYNNYSLSQPRYFCKTCRRYWTAGGSLRNVPVGGGSRKNRRSSS 102 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 7.0E-28 | 37 | 99 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.3E-33 | 42 | 99 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.919 | 45 | 99 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 47 | 83 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MDDSSTQWPQ GIGVVKVVDH HQNAGSVDQQ QKRTTLGRPQ KDQIVNCPRC NSVNTKFCYY 60 NNYSLSQPRY FCKTCRRYWT AGGSLRNVPV GGGSRKNRRS SSSSAAAAQS SSQVQGVAKL 120 SSPSSSSLHH QGHDLKLSFP PHPTTHDDIH HHYSNNTNPT FITKPNFSID QFSCGKLLLA 180 HLPNPNSSTN MTPLLPSMGL FKNPAVAVGN DDSRETTMIL PPDHQHAISN SSSASIFRSV 240 GFPPIHQDQL LFKPGSINFS LDGFSGDGDG YAASSLQLGV QQQNNDGSTA TGARLLFPFN 300 QENLNKQQAQ SAAAVAPASR DEAQFDHQQN RASSVQGDGS GAGFWTGMLG GGSW* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 8e-36 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0097s0078.1.p |