PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0097s0013.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 163aa MW: 17385.1 Da PI: 7.6051 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.5 | 9.5e-15 | 24 | 72 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 +++kG+r++k +g+Wv+eIr+p + r +lg++ tae Aa+a+ a +l Kalax.0097s0013.1.p 24 KKFKGIRRRK-WGKWVSEIRVPG----TpNRLWLGSYSTAEAAAAAHQVASFYL 72 59*****998.**********82....589*********777777776666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.08E-14 | 24 | 78 | No hit | No description |
Pfam | PF00847 | 4.1E-8 | 25 | 71 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.162 | 25 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.1E-21 | 25 | 76 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-14 | 25 | 75 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 8.3E-18 | 25 | 86 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-8 | 26 | 37 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-8 | 48 | 64 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MSFTSSSGDG GASEHESKLY MDKKKFKGIR RRKWGKWVSE IRVPGTPNRL WLGSYSTAEA 60 AAAAHQVASF YLRSASSSSM ERAEDGVSLS PRSVQKAASD AGMAVDAAHR VFMQQGQNGE 120 DVGNGRGGPV ETWEENTSSG GSWSNGGKCR ADDLNVSVDD YL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007019844.2 | 2e-39 | PREDICTED: ethylene-responsive transcription factor ERF020 | ||||
Swissprot | Q9C9I8 | 3e-30 | ERF20_ARATH; Ethylene-responsive transcription factor ERF020 | ||||
TrEMBL | A0A061FRA9 | 1e-37 | A0A061FRA9_THECC; Integrase-type DNA-binding superfamily protein, putative | ||||
STRING | EOY17069 | 2e-38 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 8e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0097s0013.1.p |
Publications ? help Back to Top | |||
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