PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0095s0040.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 395aa MW: 42374.3 Da PI: 6.7279 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 67.6 | 2e-21 | 250 | 312 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+ lk errkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN +Lk+ +++l k+++klk e+ Kalax.0095s0040.1.p 250 ERHLKQERRKQSNRESARRSRLRKQAETEELAAKVDVLMAENVTLKSDISQLVKNSEKLKLEN 312 789*********************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.8E-27 | 1 | 96 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 248 | 309 | No hit | No description |
Pfam | PF00170 | 6.8E-20 | 250 | 312 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 7.3E-17 | 250 | 314 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.128 | 252 | 315 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.88E-10 | 253 | 309 | No hit | No description |
CDD | cd14702 | 3.68E-18 | 255 | 301 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 257 | 272 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MGNNEESKSC KSDKSTSPAP QDLIGMHVHP PADWAAMQAF YGPRIPLPQY YNSAYPAGHP 60 PHPYMWALPQ AMMPSFADPY AAIYSPGGVY AHLGVPIGSP KLGLGALSTL SATDALAATA 120 LSIQTPGKTS GNTTGGSMDS ESGDSGGSSC GSGVKTSGDE QSLIKRKRER PLDIEKTEKL 180 EIQANSTVTV DTNLVPSMVA GIGVGPAPNG KLENVTALDM KTNHIVDSNL SVDAQQSGSK 240 LSSETCFQSE RHLKQERRKQ SNRESARRSR LRKQAETEEL AAKVDVLMAE NVTLKSDISQ 300 LVKNSEKLKL ENARMMEKLK NAKFEKAERI GPNDTDDDRN KTRSTENLLS RVNNSGSAVT 360 QEEEGEMYSN NNSNPTKLHQ LMDASPRADA VAAS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 266 | 272 | RRSRLRK |
2 | 266 | 273 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002279966.2 | 1e-108 | PREDICTED: common plant regulatory factor 1 isoform X1 | ||||
TrEMBL | A0A2P5E8F9 | 1e-108 | A0A2P5E8F9_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | VIT_15s0046g01440.t01 | 1e-108 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 9e-38 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0095s0040.1.p |