PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0091s0044.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 29822.4 Da PI: 7.7598 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30 | 9.3e-10 | 157 | 204 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Kalax.0091s0044.2.p 157 SHSLAERARREKISERMKILQDLVPGC----SKVIGKALVLDEIINYVQSLQ 204 8*************************9....566*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.1E-16 | 151 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.07E-8 | 151 | 204 | No hit | No description |
PROSITE profile | PS50888 | 15.466 | 153 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.8E-16 | 153 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.7E-7 | 157 | 204 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.6E-8 | 159 | 209 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MELPLVNESS FTPASPASYS LEDFWPLGAG IGNHARVLGL RTANSERAGL GNRDGSAEES 60 TVTDQSFSRN GGGGRKRRLA DESSKVGEAS GGAGQLTSST KRVNILELKE EQKSMKDEVD 120 GTSVTGAKHA EQSTKVSEPP KLDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV 180 PGCSKVIGKA LVLDEIINYV QSLQYQVEFL SMKLEAVNSS IVPKDKMLPA KDLEVSGFDS 240 AGMTFGTQPT SKYAQGPQSE WLHMHLGRNF ERAT* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015882713.1 | 1e-103 | transcription factor bHLH79 isoform X2 | ||||
Swissprot | Q69WS3 | 2e-68 | BH094_ORYSJ; Transcription factor BHLH094 | ||||
TrEMBL | A0A2C9VPE9 | 4e-99 | A0A2C9VPE9_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_013487m | 1e-100 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62610.1 | 4e-67 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0091s0044.2.p |