PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0072s0037.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | FAR1 | ||||||||
Protein Properties | Length: 98aa MW: 11256.1 Da PI: 10.8469 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29.4 | 2.6e-09 | 3 | 44 | 51 | 90 |
FAR1 51 errtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 ++r+raetrt+Ck k+ +++e gk++++ l+leHnH l Kalax.0072s0037.1.p 3 KKRERAETRTSCKVKFGIRREPsaFGKYRIYMLHLEHNHLLY 44 789*****************998889*************885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 4.8E-6 | 2 | 43 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence Send to blast |
MTKKRERAET RTSCKVKFGI RREPSAFGKY RIYMLHLEHN HLLYTRATIH MMPSQRHITE 60 IQANKIKLAD ASGIQVKRPH EFMSKKAGGV ESTGFIE* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-08 | FAR1-related sequence 5 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0072s0037.1.p |