PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0070s0076.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 257aa MW: 28130.4 Da PI: 7.6948 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 113.8 | 7.4e-36 | 52 | 105 | 7 | 60 |
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +c rC stntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvG+g+rk+++ Kalax.0070s0076.1.p 52 HCQRCGSTNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGSGCRKSRR 105 7**************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-20 | 36 | 96 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.363 | 51 | 105 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.7E-30 | 52 | 105 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 53 | 89 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MSLLRCPDVA SPQLDRLTAA TVTSPGVSCD RHVTGSVLMR MERSEGVDVS PHCQRCGSTN 60 TKFCYYNNYS LTQPRYFCKG CRRYWTKGGS LRNVPVGSGC RKSRRGRSTS ASRYHHHHRS 120 PSTANMGSTS LAASSFTDDS SSTGQAVDLA AVYANFLKQE PTQELEPANA VLTGPIGYQA 180 MTTRCAEMRR IDSNRVVPFE LPPLPNEEGL WFSQAADWFG SQLVGSNEPP SIDVFNQDSG 240 DVDQLVASWS PFDFPI* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00405 | DAP | Transfer from AT3G52440 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 4e-39 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0070s0076.1.p |