PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.0064s0096.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 92aa MW: 10723 Da PI: 8.4041 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 38 | 5.3e-12 | 37 | 82 | 2 | 47 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 Yn+Y + GF +rk+ +++s+r++ei+++++vC+keg+++ e + Kalax.0064s0096.1.p 37 AYNQYNARRGFGIRKHFTTRSRRTEEIIRKEYVCNKEGFKKVEPQM 82 5***************************************988766 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.0E-10 | 37 | 82 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 92 aa Download sequence Send to blast |
MKFGNTDNEA IFDASYEKAI DSLSEKYYDI MEEAYDAYNQ YNARRGFGIR KHFTTRSRRT 60 EEIIRKEYVC NKEGFKKVEP QMSKKDLTAA A* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.0064s0096.1.p |