PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0060s0114.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CAMTA | ||||||||
Protein Properties | Length: 913aa MW: 103320 Da PI: 6.6538 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 157.9 | 2e-49 | 16 | 130 | 4 | 117 |
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+++n+ Kalax.0060s0114.3.p 16 EaKSRWLRPNEIHAILCNHVYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNA 105 559*************************************************************************************** PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kalax.0060s0114.3.p 106 TFVRRCYWLLDKSMEHIVLVHYRET 130 **********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 73.417 | 10 | 136 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 3.0E-70 | 13 | 131 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.6E-44 | 16 | 129 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 5.1E-6 | 359 | 448 | IPR013783 | Immunoglobulin-like fold |
CDD | cd00603 | 1.68E-4 | 361 | 448 | No hit | No description |
SuperFamily | SSF81296 | 4.9E-15 | 361 | 448 | IPR014756 | Immunoglobulin E-set |
Pfam | PF01833 | 3.6E-7 | 361 | 447 | IPR002909 | IPT domain |
CDD | cd00204 | 1.43E-17 | 520 | 656 | No hit | No description |
SuperFamily | SSF48403 | 2.02E-17 | 541 | 657 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 2.5E-17 | 546 | 658 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 3.8E-8 | 547 | 626 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 16.441 | 564 | 656 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 3.5E-6 | 597 | 626 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.728 | 597 | 629 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 4.25E-7 | 736 | 811 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 38 | 760 | 782 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.071 | 761 | 790 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.059 | 763 | 781 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0017 | 783 | 805 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.908 | 784 | 808 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 3.5E-4 | 787 | 805 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 7 | 865 | 887 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.37 | 867 | 895 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.083 | 868 | 887 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 913 aa Download sequence Send to blast |
MLCDCAELDL KSIFEEAKSR WLRPNEIHAI LCNHVYFPIH VKPVNLPKSG EIHLFDRKKL 60 RNFRKDGHNW KKKNDGKTVK EAHEHLKVGN EERIHVYYAH GQDNATFVRR CYWLLDKSME 120 HIVLVHYRET CELLDSSTAP VNSNSSSGLT ELHVPFLTYE ETESGSQQSN TSNQLEYIES 180 IENVTAVTLE RRLREINTLD WDELLVDTDP SVPIAYEEGK SGGFQQQNPV MINVSKDDGS 240 ALLMNLPTEL SSGWHSACPE TRSDSINGDI LDGSYNHAVH SQLMMEAAPN NSGTLFGGQS 300 FSITQGGGGQ DQDRRWMNSS LTVESPGSVN DSIHESSISS AQNSMVPTIM DQPQSADQIF 360 TITDISPEWA FSCEKTKILL TGYFHQGFGN LLNSNLYCVC GSSCVPVEIV QTGVMRCILP 420 PHSPGQFDLY LSTERLKPVS QLKTFEYRSS LQADQNIPSD NLSDWDEFRN KMRLVRLLFS 480 SSKTLNILSA KVSEHTVNEA KKFSEKTSHT ASSWALLKQS VDENKISLHQ AEEILFEQAI 540 RNRLQDWLLE RIIEEQSPSD YDEKGLGVLH LCAILNYTWA VYLYSKSGLS LDFRDKYGWT 600 ALHWAAYYGR EDIVGALLSA GARPNLVTDP TPLIPGGCTA SDLAAQKGHN GLAAYLGEEA 660 LVDHFNDMAL AGNASGSIEF QRTCSVKRET VYDEASCLKD TLAAYRTAAD AAARINAAFR 720 EQSLKLRTEA VQGSNPEDEA RTIISAMRIQ HAFRSFESRK KMAAALRIQY GFRTWKTRRD 780 FLNMRQQAIK IQAVFRGFQV RRHYRKIIWS VGVLEKAVLR WRFKRRGFRG LQVAPVQEIT 840 SVAQEQENDV EEDFFVLGRK QAEDRVESAV IKVQAMFRSK QAQQEYRRMK WAHNQAKIEY 900 EGFFNHNAKM ES* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 72 | KKLRNFRKDGHNWKKK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002272118.2 | 0.0 | PREDICTED: calmodulin-binding transcription activator 6 isoform X1 | ||||
Swissprot | O23463 | 0.0 | CMTA5_ARATH; Calmodulin-binding transcription activator 5 | ||||
TrEMBL | A0A1R3GK40 | 0.0 | A0A1R3GK40_9ROSI; IQ motif, EF-hand binding site | ||||
STRING | VIT_05s0077g01240.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | calmodulin binding;transcription regulators |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0060s0114.3.p |
Publications ? help Back to Top | |||
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