PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0060s0114.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CAMTA | ||||||||
Protein Properties | Length: 947aa MW: 107071 Da PI: 6.4603 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 157.8 | 2.2e-49 | 50 | 164 | 4 | 117 |
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+++n+ Kalax.0060s0114.1.p 50 EaKSRWLRPNEIHAILCNHVYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNA 139 559*************************************************************************************** PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kalax.0060s0114.1.p 140 TFVRRCYWLLDKSMEHIVLVHYRET 164 **********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 73.417 | 44 | 170 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 3.0E-70 | 47 | 165 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.7E-44 | 50 | 163 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 5.4E-6 | 393 | 482 | IPR013783 | Immunoglobulin-like fold |
SuperFamily | SSF81296 | 5.07E-15 | 395 | 482 | IPR014756 | Immunoglobulin E-set |
CDD | cd00603 | 1.75E-4 | 395 | 482 | No hit | No description |
Pfam | PF01833 | 3.7E-7 | 395 | 481 | IPR002909 | IPT domain |
CDD | cd00204 | 1.52E-17 | 554 | 690 | No hit | No description |
SuperFamily | SSF48403 | 2.18E-17 | 575 | 691 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 2.5E-17 | 577 | 692 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 4.0E-8 | 581 | 660 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 16.441 | 598 | 690 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 3.5E-6 | 631 | 660 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.728 | 631 | 663 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 3.98E-7 | 764 | 845 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 38 | 794 | 816 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.071 | 795 | 824 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.062 | 797 | 815 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0017 | 817 | 839 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.908 | 818 | 842 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 3.7E-4 | 821 | 839 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 7 | 899 | 921 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.37 | 901 | 929 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.086 | 902 | 921 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 947 aa Download sequence Send to blast |
MSAFGVDQLF DFVGSEEIGG LVMEPVLLDG FQIHGFRTMN ELDLKSIFEE AKSRWLRPNE 60 IHAILCNHVY FPIHVKPVNL PKSGEIHLFD RKKLRNFRKD GHNWKKKNDG KTVKEAHEHL 120 KVGNEERIHV YYAHGQDNAT FVRRCYWLLD KSMEHIVLVH YRETCELLDS STAPVNSNSS 180 SGLTELHVPF LTYEETESGS QQSNTSNQLE YIESIENVTA VTLERRLREI NTLDWDELLV 240 DTDPSVPIAY EEGKSGGFQQ QNPVMINVSK DDGSALLMNL PTELSSGWHS ACPETRSDSI 300 NGDILDGSYN HAVHSQLMME AAPNNSGTLF GGQSFSITQG GGGQDQDRRW MNSSLTVESP 360 GSVNDSIHES SISSAQNSMV PTIMDQPQSA DQIFTITDIS PEWAFSCEKT KILLTGYFHQ 420 GFGNLLNSNL YCVCGSSCVP VEIVQTGVMR CILPPHSPGQ FDLYLSTERL KPVSQLKTFE 480 YRSSLQADQN IPSDNLSDWD EFRNKMRLVR LLFSSSKTLN ILSAKVSEHT VNEAKKFSEK 540 TSHTASSWAL LKQSVDENKI SLHQAEEILF EQAIRNRLQD WLLERIIEEQ SPSDYDEKGL 600 GVLHLCAILN YTWAVYLYSK SGLSLDFRDK YGWTALHWAA YYGREDIVGA LLSAGARPNL 660 VTDPTPLIPG GCTASDLAAQ KGHNGLAAYL GEEALVDHFN DMALAGNASG SIEFQRTCSV 720 KRETVYDEAS CLKDTLAAYR TAADAAARIN AAFREQSLKL RTEAVQGSNP EDEARTIISA 780 MRIQHAFRSF ESRKKMAAAL RIQYGFRTWK TRRDFLNMRQ QAIKIQAVFR GFQVRRHYRK 840 IIWSVGVLEK AVLRWRFKRR GFRGLQVAPV QEITSVAQEQ ENDVEEDFFV LGRKQAEDRV 900 ESAVIKVQAM FRSKQAQQEY RRMKWAHNQA KIEYEGFFNH NAKMES* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 106 | KKLRNFRKDGHNWKKK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002272118.2 | 0.0 | PREDICTED: calmodulin-binding transcription activator 6 isoform X1 | ||||
Swissprot | O23463 | 0.0 | CMTA5_ARATH; Calmodulin-binding transcription activator 5 | ||||
TrEMBL | A0A1R3GK40 | 0.0 | A0A1R3GK40_9ROSI; IQ motif, EF-hand binding site | ||||
TrEMBL | D7SY49 | 0.0 | D7SY49_VITVI; Uncharacterized protein | ||||
STRING | VIT_05s0077g01240.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | calmodulin binding;transcription regulators |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0060s0114.1.p |
Publications ? help Back to Top | |||
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