PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0058s0081.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 311aa MW: 34414.4 Da PI: 4.4659 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.5 | 1.2e-16 | 77 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg+f t eeAa+a++ a+ +++g Kalax.0058s0081.3.p 77 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFATQEEAAEAYDMAAIEYRG 128 89****99**********988422...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.838 | 1 | 42 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.008 | 5 | 48 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-8 | 9 | 44 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 5.7E-9 | 10 | 43 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.42E-25 | 77 | 138 | No hit | No description |
SuperFamily | SSF54171 | 1.24E-17 | 77 | 138 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 4.9E-12 | 77 | 128 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.558 | 78 | 136 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-18 | 78 | 137 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.3E-27 | 78 | 142 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MFPFSLSPAV YLGAYGDEEA AAHAYDLAAL KYWGPQSILN FPLSTYEEEL KGMEDQSREE 60 YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVLG NKYLYLGTFA TQEEAAEAYD 120 MAAIEYRGLN AVTNFDLSRY AKWLSCSHQE PNAHKSDSNL MSHNQLGHHQ AADSSLFTFP 180 AASLSENYTS EDADEAALMN NTTSADQWGR TTQNSKEEEE FYPSYSNTTT TSAAATLSSG 240 EDSDSKSSST VTNKRFFPDD IQTIFECTQQ ESVSSMCAGT TDFIHIGSED MIFGEAELSS 300 FTSSLFDLDQ * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028051280.1 | 1e-92 | AP2-like ethylene-responsive transcription factor At1g16060 isoform X1 | ||||
Refseq | XP_028051281.1 | 1e-92 | AP2-like ethylene-responsive transcription factor At1g16060 isoform X2 | ||||
TrEMBL | A0A0D2Q6I2 | 8e-91 | A0A0D2Q6I2_GOSRA; Uncharacterized protein | ||||
TrEMBL | A0A1U8JJ90 | 8e-91 | A0A1U8JJ90_GOSHI; AP2-like ethylene-responsive transcription factor At1g16060 isoform X2 | ||||
STRING | Gorai.009G008800.1 | 1e-91 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.2 | 2e-62 | ARIA-interacting double AP2 domain protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0058s0081.3.p |