PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0057s0138.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 595aa    MW: 66697.2 Da    PI: 6.8897
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0057s0138.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.31.4e-093944311954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+ +e+  LA+++gL+ +qV++WF N R +
  Kalax.0057s0138.1.p 394 FEHflHPYPTDAEKHILARQTGLSRSQVSNWFINARVR 431
                          554459******************************88 PP
2BELL115.52.7e-37261329472
                 BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                          elqk+ka+Lls+leeVd+rYk+y++q+++v+ssFea+ag g+a++Y +lA+ka+SrhFrcL+d i++qi
  Kalax.0057s0138.1.p 261 ELQKRKAQLLSMLEEVDRRYKHYCDQMKAVVSSFEAAAGSGAATVYSELASKAMSRHFRCLRDGIVDQI 329
                          89******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.3E-51185327IPR006563POX domain
PfamPF075262.2E-46191325IPR006563POX domain
PROSITE profilePS5007112.374372435IPR001356Homeobox domain
CDDcd000863.83E-12375436No hitNo description
SMARTSM003894.2E-10375439IPR001356Homeobox domain
SuperFamilySSF466891.15E-17376442IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-28379441IPR009057Homeodomain-like
PfamPF059203.8E-18392431IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MEADAHRQKD KFKAMNSSST GFCYSDVSSA VNPSCIPAGH VNQIHTIDQS NPDQMFSLTS  60
NMEMIGYFPS ANDDQSSMVV TSNSWQDNHR LLVDDSSLGC AFSGEGTDQR RTSQRLSLSL  120
SSINPSGGFE SFELGHNSSP TPTAHHQTED HQLRCLSSRE GYYRKSLNSL QTEQPSNLQI  180
HQHVLPQLQL IRHSKYLKPA QELLSDFCSL GSNQSEQHHH YHSQKMAPNQ KVNRVSHWDH  240
NVHAGADSSR SHNLYSLELL ELQKRKAQLL SMLEEVDRRY KHYCDQMKAV VSSFEAAAGS  300
GAATVYSELA SKAMSRHFRC LRDGIVDQIR ATKKAMGEKD DRVSRGETPR LRLLDQTLRQ  360
QKAFQQLNMM ESHPWRPHRG LPERSVSVLR AWLFEHFLHP YPTDAEKHIL ARQTGLSRSQ  420
VSNWFINARV RLWKPMVEEM YTEETKEELE NTNNNTMSHP AAAHHQLEHE NKPGPEQLIR  480
IDSDCLSSII NHHNSQDRHE PPPQPPTGLH PFGAYYNAVI ELDFSSFSGS GVSLTLGLQQ  540
HGESGGVSLA FPSPAVGDAP NGSMFYASVM DGDQGQNLAY RSLMGAQLLR DLAG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A1e-15381439563Homeobox protein Meis2
4xrm_B1e-15381439563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018829277.10.0PREDICTED: homeobox protein BEL1 homolog isoform X1
RefseqXP_018829278.10.0PREDICTED: homeobox protein BEL1 homolog isoform X1
RefseqXP_018829279.10.0PREDICTED: homeobox protein BEL1 homolog isoform X1
TrEMBLA0A2I4FCA00.0A0A2I4FCA0_JUGRE; homeobox protein BEL1 homolog isoform X1
STRINGEOY248261e-179(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-108TALE family protein