PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0055s0081.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 181aa MW: 19432.8 Da PI: 5.074 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.7 | 8.9e-16 | 21 | 68 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+ +l+g Kalax.0055s0081.1.p 21 YRGVR--SRGGKWVCEIREPRK---TSRIWLGTFPKPEMAAAAYDVAAIALKG 68 9***6..679*********843...5***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 19.585 | 20 | 76 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.1E-27 | 20 | 82 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.5E-7 | 21 | 32 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.64E-14 | 21 | 76 | No hit | No description |
SuperFamily | SSF54171 | 8.5E-18 | 21 | 77 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.6E-9 | 21 | 68 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.6E-27 | 21 | 77 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.5E-7 | 58 | 78 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MAAPNGAPSS HSSKPDQPFS YRGVRSRGGK WVCEIREPRK TSRIWLGTFP KPEMAAAAYD 60 VAAIALKGKE AILNFPGSAR SYPVPVTSSP ADIRVAAAAA AAKKQEETSR ASTKTDNEED 120 LTTTLSLSKK SGDQYVDDEE IFEMPSLLVG MAEGMMISPP RMEEPDNNAE GGSQSLWSYF 180 * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023521236.1 | 6e-57 | ethylene-responsive transcription factor ERF026-like | ||||
Refseq | XP_023521505.1 | 6e-57 | ethylene-responsive transcription factor ERF026-like | ||||
Refseq | XP_023532975.1 | 6e-57 | ethylene-responsive transcription factor ERF026-like | ||||
TrEMBL | B9GW61 | 4e-53 | B9GW61_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0003s12120.1 | 7e-54 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 7e-39 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0055s0081.1.p |