PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0055s0057.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 315aa    MW: 33558.1 Da    PI: 9.471
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0055s0057.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822204.43.3e-6331432150
               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                          ++ r p+ kErEnnkrRERrRRaiaaki++GLR +Gny+lpk++DnneVlkALc eAGw+ve+DGttyrkgskp e++++ag sas++p 
  Kalax.0055s0057.1.p   3 SGARLPSSKERENNKRRERRRRAIAAKIFTGLRTYGNYRLPKHCDNNEVLKALCDEAGWTVEPDGTTYRKGSKPVEHMDIAGGSASVTPA 92 
                          7899************************************************************************************** PP

               DUF822  92 sslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150
                          ss++        +sp++s ++sp+sssfpsp+s+ +++l++ +sl+p+l++ls+vsss+
  Kalax.0055s0057.1.p  93 SSYH--------PSPRASFNPSPASSSFPSPTSTPHANLTNGNSLIPWLKNLSSVSSST 143
                          ****........*****************************************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-594137IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MTSGARLPSS KERENNKRRE RRRRAIAAKI FTGLRTYGNY RLPKHCDNNE VLKALCDEAG  60
WTVEPDGTTY RKGSKPVEHM DIAGGSASVT PASSYHPSPR ASFNPSPASS SFPSPTSTPH  120
ANLTNGNSLI PWLKNLSSVS SSTSSPKLPH LHFHGNSISA PVTPPFSSPS AQSPRGQVDW  180
MTRTAIRGWG NSSYSFLPSS TPTSPGRQTQ PDSEWLSGGP TSPTFSLVAP NPFSLAAGGN  240
GSRMWTPGQS GTCSPAIPAD QNSDIQMPQV IHDEFAFGSN EAASGLVKAW EGERIHEVSG  300
SDDLELTLGT SRAR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-222577391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010644097.11e-127PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-110BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1R3JCF01e-124A0A1R3JCF0_9ROSI; BZR1, transcriptional repressor
STRINGXP_006442380.11e-124(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-97BES1/BZR1 homolog 4