PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0054s0017.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 225aa    MW: 25162.6 Da    PI: 10.2937
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0054s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.37e-12107148351
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           +GV++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kalax.0054s0017.1.p 107 MRGVYF--KNMKWQAAIKVE-----KKQIHLGTVGTQEEAAHLYDRAAF 148
                          79**98..47*********6.....6********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.34884161IPR001471AP2/ERF domain
SMARTSM003801.6E-4106163IPR001471AP2/ERF domain
PfamPF008471.1E-5106149IPR001471AP2/ERF domain
SuperFamilySSF541715.56E-8107151IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.2E-7109152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MVSVRKAWRK LMGLSPGPST MVGPQLVLPK NGGMPPKHLR STNPVSVYPM PPSEFEQPTP  60
SNNDGVGSSY VSASSSPIEQ RDQPISGVKR RKPHKRKVAH DRQPCLMRGV YFKNMKWQAA  120
IKVEKKQIHL GTVGTQEEAA HLYDRAAFMC GREPNFDISE EEKQELMKLN WDEFLALTRH  180
TINNKKHRRR RQVGAKKVPA AASQLSNELD EEEHGISNSS ASDD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022758728.14e-73ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758729.14e-73ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758731.14e-73ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758732.14e-73ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022758733.14e-73ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A3S3QLM12e-64A0A3S3QLM1_9MAGN; Ethylene-responsive transcription factor-like protein isoform X2
STRINGXP_010242670.15e-64(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.27e-46ERF family protein