PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0051s0002.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 372aa MW: 40307.9 Da PI: 8.2815 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.3 | 6.3e-32 | 193 | 248 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+ lmkv+gLt+++vkSHLQkYRl+ Kalax.0051s0002.2.p 193 KQRRCWSPELHRRFIHALQQLGGPHVATPKQIKVLMKVDGLTNDEVKSHLQKYRLH 248 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.03 | 190 | 250 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.79E-17 | 190 | 251 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 6.9E-28 | 191 | 251 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-26 | 193 | 248 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.9E-7 | 195 | 246 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence Send to blast |
MDFAEKMHKC REYVEALEVE RRKIQVFRRE LPLCLELVSQ AIDACRQQLS TAAAAGTSRE 60 CFHVRRKQRS ECSEQTSCHG PVLEEFIPIK RAASCSSEGE EEEDESSQKS GDKPAGKKSD 120 WLRSVQLWNQ SPDPAPASEV KKNVGAFRPF DKESKAVVAA AEMAERQPVE DKPASSTTLK 180 SRNEESGQAT QRKQRRCWSP ELHRRFIHAL QQLGGPHVAT PKQIKVLMKV DGLTNDEVKS 240 HLQKYRLHMR RPVATAPSSA IWVPPPDSAA PALKPAATTS SSDQPEANNS KKEARAPSNG 300 VYAPVSTVGT PHAQPATQTS DQKVQSGSHC EEDDNGSHSA HGGAGAHCSS PASSSSTRTT 360 ATATASPMPS S* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003631224.1 | 1e-108 | PREDICTED: myb family transcription factor EFM | ||||
Refseq | XP_010695844.1 | 1e-108 | PREDICTED: myb family transcription factor EFM | ||||
Swissprot | Q9FPE8 | 1e-88 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A0J8B7X9 | 1e-107 | A0A0J8B7X9_BETVU; Uncharacterized protein | ||||
TrEMBL | A0A438ECN5 | 1e-107 | A0A438ECN5_VITVI; Transcription factor HHO3 | ||||
STRING | XP_010695844.1 | 1e-107 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 3e-87 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0051s0002.2.p |
Publications ? help Back to Top | |||
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