PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0050s0040.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 553aa    MW: 60255.7 Da    PI: 7.0987
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0050s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10422482363
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          ++kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  ++  l+ e+a l s++
  Kalax.0050s0040.1.p 422 DSKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQVIVLQRESAGLSSQN 482
                          68********************************************999999999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-16420484IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.967422485IPR004827Basic-leucine zipper domain
PfamPF001702.1E-9423482IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-11424481No hitNo description
SuperFamilySSF579595.84E-11424475No hitNo description
CDDcd147038.09E-23425476No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MGDAGKAGNE TMQRVQSSFG TVHSSMPEQT MSLNHQLELT HLSTSLNVAP SKHFGQGFGV  60
DHGKRALVSP SNNGQIPPLS TYSHIPVCRP SVLSMGSQSF VQSPYHSRSI SQPPVFNLDS  120
LPPLSPSPFR DSTPNANQLS VDVNMEDREA RSHLLPPSPY TRSNGATRPG ESLPPRKAHR  180
RSNSDIPFGF SMVMQSSPPL LPLKGPITLE RSASDRENLG GTSQSICRTS RNKVIDYNGE  240
GTGERKSEGE VVDDLFNAYM NLDGTDATKP AVNGEKNSNS HHEDLDSQAS GSKTNAGENS  300
DNEAESCINE SGNGVVKAGT HGSGCTERRE GIKRSAVGDI APTARHYRSI SMDSFMSNMH  360
FEEELPKLPA SPGPRAGEMS SSNLFDKNSN TFCLEFGNGE FSGAELKKIM ANEKLAEIAL  420
ADSKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQVIV LQRESAGLSS  480
QNNELRFRLQ AMEQKVQLCD ALNEALSAEV QRFKFATQEL SSNAQMFQQQ SYQFNSSQAQ  540
QNNMSSKHDS TN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023883422.10.0transcription factor RF2a
TrEMBLA0A2N9G6H50.0A0A2N9G6H5_FAGSY; Uncharacterized protein
STRINGEOX978370.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-134bZIP family protein