PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0048s0063.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 372aa    MW: 39835.7 Da    PI: 8.5665
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0048s0063.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.95.2e-3964122361
               zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                          e++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s
  Kalax.0048s0063.1.p  64 EQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTS 122
                          6889****************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074789.0E-2664120IPR003851Zinc finger, Dof-type
PfamPF027017.3E-3365121IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.50667121IPR003851Zinc finger, Dof-type
PROSITE patternPS01361069105IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MLQELLLGGG SSSTTTSSAY SGGEGKALIS NNINGGIIAE VTTTKNPSHD NSNNGSNNNN  60
SNLEQNLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK  120
TSFTSALPSV SKSTITGKPK AYSSSADLLL KSGLGNYGLQ DPQDQSSLHH PHHHPLLWSS  180
SPHQPQASHL LAFLRSTQNL NPSDHSHFMS SSPHQSIDQS GFTALNLLNS QTPLSGLDYP  240
SIGVCNSMLR NNNQPSTHHQ HQQNEVAQQL GGVDPNSRMH ELYQRLKLST TGHTNSYSGG  300
GGTEDSHAHV LLGNRVVSAS SSPTSTRNNA LDSVPVTMGG GSDLGLWNIP AAYSTWTNDH  360
LPATTNGACP F*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1R3K4S21e-59A0A1R3K4S2_9ROSI; Zinc finger, Dof-type
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.19e-35TARGET OF MONOPTEROS 6