PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0041s0045.4.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 291aa    MW: 32503.7 Da    PI: 6.3301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0041s0045.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-1894143154
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          s y+GVr++k +g+W+AeIrd +     r +r++lg+f t+eeA +a+ a  +++e
  Kalax.0041s0045.4.p  94 SVYRGVRQRK-WGKWAAEIRDpF-----RsARVWLGTFNTPEEASQAYQAKLREYE 143
                          78*******9.**********66.....56********************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.81E-1794142IPR016177DNA-binding domain
PfamPF008479.3E-1294143IPR001471AP2/ERF domain
CDDcd000183.62E-2194135No hitNo description
Gene3DG3DSA:3.30.730.107.9E-2295142IPR001471AP2/ERF domain
PROSITE profilePS5103219.28295153IPR001471AP2/ERF domain
SMARTSM003802.6E-1595155IPR001471AP2/ERF domain
PRINTSPR003672.6E-1096107IPR001471AP2/ERF domain
PRINTSPR003672.6E-10118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MSVCARSVRK VRVIYSDPYA TESSSDEEDN ATGVARVAEI RKRVVKEIVI PVVGMKRKAR  60
GSGLVKKESG VGDGLLHAER KSMNMTQSLS KMPSVYRGVR QRKWGKWAAE IRDPFRSARV  120
WLGTFNTPEE ASQAYQAKLR EYEALGATDS ATPKKIKTGF KKTILKAKKD VSEMKNESTL  180
LPSHRRSVSE DAESHAPSSP VDDKDNKKEG DDEVKQPQFI RPPPEVNGSL DQEIGLGFEF  240
NSFLNDYEFS QLFDDFDKLD DDILDGVDLS KALDNLQLPW MEESLNIACP *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-28ERF family protein