PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0039s0141.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 365aa MW: 39585.9 Da PI: 7.726

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0039s0141.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.1	8.4e-33	193	248	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Kalax.0039s0141.1.p 193 KQRRCWSPELHRRFIHALQQLGGPHVATPKQIKELMKVDGLTNDEVKSHLQKYRLH 248 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.64E-18	190	251	IPR009057	Homeodomain-like
PROSITE profile	PS51294	15.314	190	250	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	6.3E-29	191	251	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.9E-27	193	248	IPR006447	Myb domain, plants
Pfam	PF00249	5.7E-8	195	246	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence Send to blast
MDFAEKMHKC SEYVEALEVE RRKIQVFRRE LPLCLELVSQ AIDACRQQLS TAAAAGTSRE 60 CFHVRRQQRS ECSEQTSCHG PVLEEFIPIK RAASCSSECE EEEDESSQKS GDKPAGKKSD 120 WLRSVQLWNQ SSDPAPASEV KKSVGAFRPF NKESKAVVAA AEMAERQPVE DKPASSTTLK 180 SRNEESGQAT QRKQRRCWSP ELHRRFIHAL QQLGGPHVAT PKQIKELMKV DGLTNDEVKS 240 HLQKYRLHMR RPGAAAPSSA IGVAPPDSAA PALEPAATTS SSDQPEANNS KKEARVYAPV 300 STVGTPYAQP ATQTSDQKVR SGSHCEEDDN GSHSTHGGAG AHCRSPASSS STHTTATASP 360 MPSS*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence Send to blast

MDFAEKMHKC SEYVEALEVE RRKIQVFRRE LPLCLELVSQ AIDACRQQLS TAAAAGTSRE  60
CFHVRRQQRS ECSEQTSCHG PVLEEFIPIK RAASCSSECE EEEDESSQKS GDKPAGKKSD  120
WLRSVQLWNQ SSDPAPASEV KKSVGAFRPF NKESKAVVAA AEMAERQPVE DKPASSTTLK  180
SRNEESGQAT QRKQRRCWSP ELHRRFIHAL QQLGGPHVAT PKQIKELMKV DGLTNDEVKS  240
HLQKYRLHMR RPGAAAPSSA IGVAPPDSAA PALEPAATTS SSDQPEANNS KKEARVYAPV  300
STVGTPYAQP ATQTSDQKVR SGSHCEEDDN GSHSTHGGAG AHCRSPASSS STHTTATASP  360
MPSS*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003631224.1	1e-104	PREDICTED: myb family transcription factor EFM
Swissprot	Q9FPE8	2e-91	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A438ECN5	1e-102	A0A438ECN5_VITVI; Transcription factor HHO3
STRING	XP_010695844.1	1e-102	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	5e-90	G2-like family protein

Link Out ? help Back to Top
Phytozome	Kalax.0039s0141.1.p

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]