PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0034s0095.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CO-like | ||||||||
Protein Properties | Length: 260aa MW: 28765.8 Da PI: 9.1371 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.5 | 9.7e-07 | 5 | 47 | 5 | 40 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40 +C++++ + +C++++++lC C +H H +v Kalax.0034s0095.1.p 5 VCDTCGTAASTVYCHTDSTYLCSGCDNFIHAEanpmaghHFRV 47 6******99*********************6677888855555 PP | |||||||
2 | CCT | 30.9 | 1e-11 | 207 | 250 | 1 | 43 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAes.RpRvKGrFvkq 43 R+++++R++eKrk ++ + k r s+Ka+A s RpR++G+F+++ Kalax.0034s0095.1.p 207 RQERVQRFREKRKAKQLKMKLRFPSKKAYAASiRPRINGKFARR 250 99***************************9877*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50119 | 9.442 | 5 | 49 | IPR000315 | B-box-type zinc finger |
CDD | cd00021 | 1.11E-5 | 5 | 49 | No hit | No description |
PROSITE profile | PS51017 | 10.11 | 207 | 250 | IPR010402 | CCT domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MLRCVCDTCG TAASTVYCHT DSTYLCSGCD NFIHAEANPM AGHHFRVPIQ TTANPSISLL 60 YGEFSALNQC QVETAAAARE EYFFYGSDTA VRSDDLVTLT STRSDDVVQT SCGPHWGIQR 120 VFGDMSVPIV PSLELNQSLQ RTKHPEVGTI QAPSVYTPPN CQTVQKSVTY SIKPDIALSF 180 TTPSSQRLKA KAVECLGQPS AENPISRQER VQRFREKRKA KQLKMKLRFP SKKAYAASIR 240 PRINGKFARR PIDKKVELN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02380.1 | 3e-21 | CONSTANS-like 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0034s0095.1.p |