PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0034s0045.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 422aa MW: 46834.3 Da PI: 5.5277 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.3e-19 | 149 | 199 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f taeeAa a+++a+ +++g Kalax.0034s0045.1.p 149 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAEEAALAYDEAAIAMYG 199 56*****999.**********8...3.35***********************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.38E-32 | 149 | 208 | No hit | No description |
Pfam | PF00847 | 1.7E-14 | 149 | 199 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-21 | 150 | 209 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.9E-37 | 150 | 213 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.431 | 150 | 207 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-31 | 150 | 208 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 151 | 162 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 173 | 189 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence Send to blast |
MGRDGASGKF EPHALKIEPY LINTLRLRKF SIFLKHNDIS RTLSKQRLAQ EKSSDAGETQ 60 ILGFVHRFWT SIQRLMACAE FMSAGGNFHK TKTRIRKRTG TKPVAETIAK WKQYNKKLDS 120 EGNPIRRVPA KGSKKGCMKG KGGPENYHCN YRGVRQRTWG KWVAEIREPN RGSRLWLGTF 180 PTAEEAALAY DEAAIAMYGP CARLNMPDRV VKKHDSEENS KDSSTVISTC CSESMSTASN 240 NSDAHREDSA ERHYQSKLVV SKLEKVARSS VPNPDVPCLT NEAASSNLEA ESRNDPAVSM 300 DANQGDGVND WLQTQSYSMD ELFDAQELLA EIENNPLERD ARQDEGHPPS TDLLFSVLND 360 DNTQCMGSVD LAGQPLNPDA GLFEGIDVGL LGDGLDLSFL EPGRQEDEAP FDYCSFFDLD 420 L* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 8e-19 | 150 | 210 | 2 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 3e-32 | DRE-binding protein 2A |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0034s0045.1.p |