PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0033s0022.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 93aa    MW: 10744.1 Da    PI: 7.6788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0033s0022.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.32.1e-092341451
                  AP2 14 rWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                         +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kalax.0033s0022.1.p  2 KWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 34
                         9*******4.....5*********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.14E-7237IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.1E-7239IPR001471AP2/ERF domain
SMARTSM003800.0025249IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MKWQAAIKVD KKQIHLGTVG TQEEAAHLYD RAAYMCGREP NFELSEVEKQ ELKQLNWDEF  60
LEITRSTITS KKHQRRGHSE FQERVSALIT AQ*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021690390.15e-44ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_021690391.15e-44ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_021690393.15e-44ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_021690394.13e-44ethylene-responsive transcription factor-like protein At4g13040 isoform X2
SwissprotQ56XP96e-34ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A251JLN92e-42A0A251JLN9_MANES; Uncharacterized protein
STRINGcassava4.1_015296m3e-43(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-36ERF family protein