PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0032s0096.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 434aa MW: 48612.4 Da PI: 8.3819 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.9 | 4.2e-32 | 250 | 303 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Kalax.0032s0096.1.p 250 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 303 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.51E-15 | 247 | 303 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.8E-28 | 248 | 303 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-23 | 250 | 303 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.9E-7 | 251 | 302 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis | ||||
GO:0048481 | Biological Process | plant ovule development | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence Send to blast |
MELFPAQQPD LSLQISPPNT TTKPTSPWPR RTSSAAEEED HHSMDLQGFW KRALDNNNSA 60 TMAAKPNKNS NTKSSSDHYS DILSLSNPSR SIDNPFEPHH HHSLNNNPLI QHNNPFHQIH 120 HHFQSNPQNQ HHHHHHHHQA AAAASFLGHH EQLSFLKPIR GIPIYQSPNF NPNNSTNFLH 180 HHQQQQSVLD GLSYLPSSAA SRAANTSCFM NNNMNGGGTV SPCTNNNILL RSSSSRFLSR 240 FPGKRSMRAP RMRWTSTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM 300 YRTVKTTDRA AASSDAYENG SSGDNSEDLM LDITNPIKKG DHQTWGQQGR TSTSNQDREN 360 YHGLWSNSSS REAWLHGRPK DSLVGNHINF IEEMDPKPLS YNERLGEVSS LSEGYSSSNS 420 VKPNLEFTLG RSH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-16 | 251 | 305 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00174 | DAP | Transfer from AT1G32240 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015898005.1 | 1e-115 | probable transcription factor KAN2 isoform X3 | ||||
TrEMBL | A0A067KUB8 | 1e-114 | A0A067KUB8_JATCU; Uncharacterized protein | ||||
STRING | XP_006471518.1 | 1e-108 | (Citrus sinensis) | ||||
STRING | XP_006432742.1 | 1e-108 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32240.1 | 4e-61 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0032s0096.1.p |