PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0022s0149.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 317aa    MW: 34201.5 Da    PI: 10.6695
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0022s0149.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.53.5e-10284303322
                          -SS-EEEEEEE--TT-SS-E CS
                 WRKY   3 DgynWrKYGqKevkgsefpr 22 
                          D+++WrKYGqK++kgs++pr
  Kalax.0022s0149.2.p 284 DEFSWRKYGQKPIKGSPHPR 303
                          99*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105338.5E-16236280IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.5E-9271303IPR003657WRKY domain
PROSITE profilePS5081111.612277303IPR003657WRKY domain
SuperFamilySSF1182901.83E-7279303IPR003657WRKY domain
SMARTSM007740.0017282315IPR003657WRKY domain
PfamPF031063.7E-6284303IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MAVELMMGYR AAATENNLPA KMEEAASAGL QSVEQLIRLL SQRQQQMDRS NSNSNSNSNG  60
SCVNELSSKV ESSDLDYGAV ADVAVNKFKK MISLLDRSRT GHARFRRAPV AQKAADPVAQ  120
TSLRSEEKAS AQSSLNGGPR AIPTSTSSQR LPPLPQHHHH HHSHPVHHKI VHSANTVLTK  180
TAPKDSTATI SFSGASSFVS GLSGETESVQ PSMSSGFQFT LMSQSSGKPP LSSSLKRKCS  240
SVDDSSRCGG SSARCHCSKK RKSRVKRVVR IPAISLKMAD IPPDEFSWRK YGQKPIKGSP  300
HPRRPGVDKD LTFADF*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008452580.11e-92PREDICTED: probable WRKY transcription factor 7 isoform X2
TrEMBLA0A200QZM37e-92A0A200QZM3_9MAGN; DNA-binding WRKY
STRINGXP_008452579.15e-90(Cucumis melo)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-21WRKY DNA-binding protein 7