PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0022s0029.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 325aa MW: 35702.9 Da PI: 6.0943 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 90.5 | 1.8e-28 | 31 | 125 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Li+++r +e+r+rrg+ + +p+W++vs++++++g++r+++qC+++w+nl+++ykkike+e++ ++e++s +++ Kalax.0022s0029.1.p 31 RWTRQEILVLIQGKRVVETRVRRGRasgltfgpgQVEPKWASVSSYCKRHGVNRGAVQCRKRWSNLAGDYKKIKEWESQTKEETESFWVM 120 8**********************97778888888*********************************************99999999999 PP trihelix 82 fdqle 86 ++l+ Kalax.0022s0029.1.p 121 RNDLR 125 99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.353 | 31 | 97 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 7.2E-13 | 31 | 121 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-4 | 31 | 96 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MALSLAVDGG DADGVAAVAA EETAKAPRLP RWTRQEILVL IQGKRVVETR VRRGRASGLT 60 FGPGQVEPKW ASVSSYCKRH GVNRGAVQCR KRWSNLAGDY KKIKEWESQT KEETESFWVM 120 RNDLRREKKL PGFFDREVYD ILEGDSPATC LALALGPALQ ADADDAEAVF DSGRTTAAAA 180 AQDGLFSDED DGNETPLSKE SPPTRVAAPL PISEKVYQPY SSSAQADARN EKEPARHQEG 240 GSSSQDARKR RRYTVEDGDV EPTLSLQDKL IHVLERNGEM LHSQLQAHNN NLQLDREQRK 300 DNAASIVGVL NKLADALVKI AEKL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 247 | 251 | RKRRR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012088721.1 | 1e-140 | trihelix transcription factor ASR3 | ||||
Swissprot | Q8VZ20 | 1e-107 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A067JH78 | 1e-139 | A0A067JH78_JATCU; Uncharacterized protein | ||||
STRING | XP_002512665.1 | 1e-133 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-108 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0022s0029.1.p |
Publications ? help Back to Top | |||
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