PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0020s0112.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 549aa MW: 59233.1 Da PI: 6.6271 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.8 | 1.5e-30 | 231 | 290 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+a+d ++++itYeg+Hnh+ Kalax.0020s0112.1.p 231 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaACPVRKQVQRCADDMSILIITYEGTHNHP 290 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.6E-31 | 217 | 292 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-27 | 224 | 292 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.369 | 226 | 292 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.1E-36 | 231 | 291 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.1E-27 | 232 | 290 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006952 | Biological Process | defense response | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence Send to blast |
MEGYNASLER ASGGGRAMED SVELSSTDSD GDRACNLQSV TSKDAQLESA KIEMGEVRKE 60 NERLRLHLDK MIKDYQALQK QVQDIENAEL PSTSPDFNQA TAASDSRQEF EEENELVSLS 120 LGRTSSIDLK GSKVIQGNES DSLALGLEDF KVFEEPKSDA PIENLAVQGH EIIRSSEEET 180 TREELAAASS WPPQKVSKRT REDNNEPSSY PRSSGKRARV CLRIRCETPT MNDGCQWRKY 240 GQKIAKGNPC PRAYYRCTVA AACPVRKQVQ RCADDMSILI ITYEGTHNHP LPISATGLAS 300 TTSAAASMLL SGSSSTTVAN PTTSRPSHSF SAIPNKLIFQ QQYQLPTSSS SFNPNSHHQT 360 ITLDLTSSNN AATSSQHSPH FNLFSRSSSM SYPTHQYSSR PTSLSFSSSS PANPPSWANN 420 NNMLYNSSTS MSQFATSTLD YSHFYQSTMH RNSNNPASNS NSTSPPVTES AITAALTSDP 480 SFQSALAAAL TTIIGGRVVP SFGSSSTHAQ RAGSSSLMLG QAPLPIQPAA LAKSTSTSPK 540 DNVKEHSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-18 | 218 | 292 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012438726.1 | 5e-99 | PREDICTED: probable WRKY transcription factor 61 isoform X3 | ||||
STRING | Gorai.008G191200.1 | 3e-97 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 4e-61 | WRKY DNA-binding protein 72 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0020s0112.1.p |