PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0020s0091.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 405aa    MW: 45367.3 Da    PI: 6.9177
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0020s0091.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.11.9e-1189830128
                  NAM  30 leevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkg 116
                            ++i++ di +++Pw+L    k+++++++fF+k++ k+        + k g+W+ + ++++++s    ++ ++g+k t  f   ++p  
  Kalax.0020s0091.1.p   8 S-RAIPDKDISSFDPWELYVGRKTSQEHVFFFTKKRIKT--------SHKGGFWSYSETETRIYSLsdgSNLQIGVKATYRFD--TDPGL 86 
                          3.579*************866667778889999886654........3469************9987666677*********8..78899 PP

                  NAM 117 ektdWvmheyrl 128
                           +t+W m ey l
  Kalax.0020s0091.1.p  87 IRTNWNMMEYGL 98 
                          9*********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.9931114IPR003441NAC domain
SuperFamilySSF1019413.53E-185112IPR003441NAC domain
PfamPF023658.7E-62297IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MADPDFKSRA IPDKDISSFD PWELYVGRKT SQEHVFFFTK KRIKTSHKGG FWSYSETETR  60
IYSLSDGSNL QIGVKATYRF DTDPGLIRTN WNMMEYGLPG NKPLDWVVCR VFTLGDGKVD  120
PPETRPAASG SSSTAPTEKL QHSQRSKQTA TTRFSAGPVA SNNDSSQLNF INTALGSSSM  180
HMYTWPAVLQ QDVASMGTVY RSQEHSGEQR GYTLNQPQIN MATQQQQQQQ PRPVNTHSDE  240
QWDFNHNPQP VNMPTTTLQG PHRPAHPAST MVSTTPYSMV NQQQLPCPDL QPDVGSIFGT  300
RTPGWTFNPD FTQPFYNHNQ QPFNMPILQE PPYPANNMLS TNYFNMENQQ LPGITTSPIL  360
PPGVGSTPNP RHIGGNYDQS SVPPQGSDSE TFLQEWQPSK YRKI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.13e-11NAC domain containing protein 58