PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0017s0105.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 470aa    MW: 50232.7 Da    PI: 8.7598
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0017s0105.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1239.9e-39125184261
               zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                          +++ l+cprC+s++tkfCyynny++ qPr+fCk+C+ryWt+GGa+rnvPvG+grrk+k+s
  Kalax.0017s0105.1.p 125 PDRVLPCPRCNSMDTKFCYYNNYNVLQPRHFCKGCQRYWTAGGAMRNVPVGAGRRKSKNS 184
                          67889****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-29122182IPR003851Zinc finger, Dof-type
PfamPF027011.6E-31127183IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.435129183IPR003851Zinc finger, Dof-type
PROSITE patternPS013610131167IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MLQLKDPAIK LFGKTIPYHS AAAWDADEFG GVSVSVAASC SDNDRASSAG SEIGQADKEK  60
VSGARIVKGL KQQVEDESVT GSVSLETSEN QKTPSVNEET GKPKAGSSNI TEEANSKVKT  120
PLKKPDRVLP CPRCNSMDTK FCYYNNYNVL QPRHFCKGCQ RYWTAGGAMR NVPVGAGRRK  180
SKNSALQNRF LTISEALQAS SAESPNGMVP GYPGLKHGSV LTIGSDATVS ASTCSVSNLK  240
EMPFLDPGSN LTYKVSEQVV TKSTKVGEIN SSGSCITASN EVESKQHGHG SFTPTFNSCI  300
TQIPCISAWP NPWTAAIPPP ALPHPGFALP FVTTAYWPCA AIPCSWNGSW VTPQPLPKTM  360
TDAGGIPNSK PPVLGKHSRD GEVLPKDRSV KQTSVLTPKT LRIDHPEEAA KSSIWETLGI  420
KNETFSKGGL FRELKSKEAD NIKLVPGNYA HLTSNPAALS RSLNFHEVS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2I4FLS21e-115A0A2I4FLS2_JUGRE; cyclic dof factor 3-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47500.15e-78cycling DOF factor 3