PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0016s0251.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 614aa MW: 67493.4 Da PI: 5.5119 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.1 | 1.1e-30 | 360 | 418 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Kalax.0016s0251.1.p 360 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCWARKQVERSRTDPNMLVITYTSEHNHP 418 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.914 | 354 | 420 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.2E-30 | 354 | 420 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.32E-26 | 357 | 420 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.2E-37 | 359 | 419 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.0E-25 | 361 | 418 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 614 aa Download sequence Send to blast |
MCSSSSFYGL PREGSVLDDR ERHHQGDLAD MIRSISGAAT RLYSDSFSSS WTQPYHLATD 60 NDNIVTDHQV PLTATAAAQD QNDPLFTFYH DQQQQPGACL VRPSSHLDVG YFGADPFSST 120 MIRDPLPRED GMMMMMNCSS NDHLYYSMSA SNYTLATHNN LLPATASRTM TLMIMKSEGI 180 LEDASSESGS HLLCSSSATK DISSTIGDLG LQAEPTQQCQ EPAAATSSII SMPNCNVIPR 240 MHHISPDIVS QQASAPAPPS IDYNELPISP QNKETLLLKP APVSSSDLAV FGGSGDIDSS 300 SNRMLDQTRT AENICGHLTE TISSPRNPAV KRRKNLAKKV VCVPAPAPAN SRSSGEVVPS 360 DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CWARKQVERS RTDPNMLVIT YTSEHNHPWP 420 TQRNALAGST RSQPSKNKSS TPGSNTTGAI QQQQHLIEHG HALHSKCNVE ESEKQRGDEP 480 ADANKIMITS HSKDEKEVTA ISDTFIKEEL GDADHVGDED DTNYQLDRND DCDANQLGAT 540 YNHYDSNKHW CSQKIFRPTI GLHEDGNYQQ TPVEQSQDDF FAELGEISGN DAFSYLDWPS 600 LERKTTTRTL HDG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-23 | 337 | 421 | 5 | 80 | Disease resistance protein RRS1 |
5w3x_D | 2e-23 | 337 | 421 | 5 | 80 | Disease resistance protein RRS1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 5e-64 | WRKY DNA-binding protein 35 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0016s0251.1.p |