PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0015s0148.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 348aa MW: 36405 Da PI: 6.1636 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 70.5 | 2.5e-22 | 256 | 318 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ kv++L +eN++Lk+el++l+ e+ +l +e+ Kalax.0015s0148.1.p 256 ERELKRQKRKQSNRESARRSRLRKQAECEELQAKVEKLNSENRDLKEELQRLSGECVQLSTEN 318 89********************************************************99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.2E-28 | 1 | 90 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 2.1E-18 | 250 | 315 | No hit | No description |
SMART | SM00338 | 9.4E-20 | 256 | 320 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.8E-19 | 256 | 318 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.944 | 258 | 321 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-12 | 259 | 314 | No hit | No description |
CDD | cd14702 | 2.61E-23 | 261 | 311 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 263 | 278 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence Send to blast |
MGAGEEGTAT KTSKAASSAQ ETPTTPSYPD WSNMQAYYGA SGPPPPFFAS TVASPPPHPY 60 MWAGQPMMSP YGAYPGLYPP GGVYAHPAMP MTPGTAQPNV DLEVKASDGK DRASSKKSKG 120 NSGNSGNGGK VGEGGKVVSD SGNDGASQSA DSGSEGSTDA SDENTDHQGL SANKKGSFNQ 180 MLADAASAHN STVQGKPVSA PATNLNIGMD LWSTTPVGVG AMKMRPNPTG ASAAMVPVIA 240 GSRNGVMTDS QWVQDERELK RQKRKQSNRE SARRSRLRKQ AECEELQAKV EKLNSENRDL 300 KEELQRLSGE CVQLSTENAS IKEELTRLCG PEAVANLENN NSTPSNP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 272 | 278 | RRSRLRK |
2 | 272 | 279 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter (PubMed:1373374). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:1373374, ECO:0000269|PubMed:22718771}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023904476.1 | 1e-154 | G-box-binding factor 1 isoform X1 | ||||
Swissprot | P42774 | 4e-99 | GBF1_ARATH; G-box-binding factor 1 | ||||
TrEMBL | A0A2P5AIE3 | 1e-152 | A0A2P5AIE3_PARAD; Basic-leucine zipper transcription factor | ||||
STRING | XP_004143501.1 | 1e-148 | (Cucumis sativus) | ||||
STRING | XP_004172454.1 | 1e-148 | (Cucumis sativus) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.1 | 6e-77 | G-box binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0015s0148.1.p |