PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0014s0194.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 382aa    MW: 41496.4 Da    PI: 7.5183
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0014s0194.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.43.7e-393493261
               zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                         +e+a kcprCds ntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rknk+s
  Kalax.0014s0194.1.p 34 PEQAPKCPRCDSGNTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNVPVGGGCRKNKRS 93
                         78899*****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-283292IPR003851Zinc finger, Dof-type
PfamPF027015.6E-333692IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.0033892IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104076IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MDLPRLNLQE MNTNSCEKNS QAVAADEKKP RPQPEQAPKC PRCDSGNTKF CYYNNYSLSQ  60
PRYFCKACRR YWTKGGTLRN VPVGGGCRKN KRSAKRALDS HHHLLLQSKV DNVLSSAASS  120
EQQNNNHGGN GLSNFSSPLS YDSSGTGDSL SMAFARLQKQ CNSGHLGFEF DPQNSIFGHH  180
LQQHAPIFGN PVTNNLLVQT QTQTLLQPKS TNLGFLSNFF DTQAATNYNS QTCLFNYNGF  240
ENAADQYPKD QSHQSHSQPL LPYEDLSLSN VAADPTKDGF NLMSSNSVKH EMCNNHNNDG  300
LNDNRILWGF PWQQLGSNNN GGGSSSENDN NNVVLGSGMS NNVGNGYEAA GGAGGGGRES  360
WSNSGLGSAP SWPNLINSAL M*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-37TARGET OF MONOPTEROS 6