PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0012s0051.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 282aa MW: 31213.7 Da PI: 8.6162 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 51.9 | 2e-16 | 18 | 108 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ + +L++a ++ +l+rg+l++++W+ev++++ ++++ r+ +qCk++++ ++k+yk +k++++ + s++p++d+l Kalax.0012s0051.1.p 18 CWTEEATSTLVDAWGKRYVELSRGNLRQKDWQEVADAVnarhgHSKKTFRTDVQCKNRIDTIKKKYKTEKARASASNGALASNWPFYDRL 107 8*************************************988877778889************************99888889*******9 PP trihelix 86 e 86 + Kalax.0012s0051.1.p 108 N 108 7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.5E-25 | 16 | 110 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MDESSPPPSR PIPVREDCWT EEATSTLVDA WGKRYVELSR GNLRQKDWQE VADAVNARHG 60 HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SASNGALASN WPFYDRLNAL IGPNVKKAVT 120 GGGGGGQVGT PPLPANRKAG PHASTLPKKR GAAAASMDDS YFRRNYSAVA AAAAAADLDE 180 PEEADEEERM EDEESERSRS SGDEEGDGDG IKKLAKAIKR FGEIYARVEG EKQRQMVELE 240 KQRMQFAKEL EVQRMQMFMN TQVQLEKINR SKGSGSNDQY S* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019419880.1 | 1e-111 | PREDICTED: trihelix transcription factor ASIL1-like | ||||
Swissprot | Q9LJG8 | 3e-35 | ASIL2_ARATH; Trihelix transcription factor ASIL2 | ||||
TrEMBL | V7BTZ9 | 1e-108 | V7BTZ9_PHAVU; Uncharacterized protein | ||||
STRING | XP_007148047.1 | 1e-109 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-62 | sequence-specific DNA binding transcription factors |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0012s0051.1.p |