PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0010s0264.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | TALE | ||||||||
Protein Properties | Length: 636aa MW: 71246.3 Da PI: 6.7658 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.7 | 9.7e-09 | 405 | 442 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++ LA+++gL+ +qV++WF N R + Kalax.0010s0264.1.p 405 FEHflHPYPTDVDKHILARQTGLSRSQVSNWFINARVR 442 554459******************************88 PP | |||||||
2 | BELL | 115 | 3.8e-37 | 268 | 336 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+ka+Lls+leeVd+rYk+y++q+++v+ssFea+ag g+a++Y +lA+ka+SrhFrcL+d i++qi Kalax.0010s0264.1.p 268 ELQKRKAQLLSMLEEVDRRYKHYCDQMKAVVSSFEAAAGNGAATVYSALASKAMSRHFRCLRDGIVDQI 336 89******************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 2.1E-50 | 189 | 334 | IPR006563 | POX domain |
Pfam | PF07526 | 1.3E-46 | 195 | 332 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 11.774 | 383 | 446 | IPR001356 | Homeobox domain |
SMART | SM00389 | 7.6E-9 | 386 | 450 | IPR001356 | Homeobox domain |
CDD | cd00086 | 9.30E-12 | 386 | 447 | No hit | No description |
SuperFamily | SSF46689 | 5.13E-17 | 387 | 453 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.1E-28 | 389 | 453 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 1.0E-17 | 403 | 442 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0048481 | Biological Process | plant ovule development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0009506 | Cellular Component | plasmodesma | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 636 aa Download sequence Send to blast |
MEAEAHRHED KLRTMNSSST GFCYSDISTS TLPTHLMNQI HTIESNPDQM FNLTTNMEMI 60 GYFPPANDDQ SSMVVAQDHS NSWQENHRLL VDDSSLRCVF SGEGNNQRTS QGLSLSLSSI 120 NPSAGFESFD LRHTSSTTPT TNHQMRYVSS TSREGYYGKP LHSIPPEQQM MPDGFLGKVS 180 NLHIHQHGLH QFHLIRHSKY LTPAQELLNE FCSLGSKQSE HHHYHQQKKS SKQKVNRVNQ 240 WDHNDHAGTC SNEDSSRSHN LNSLVLLELQ KRKAQLLSML EEVDRRYKHY CDQMKAVVSS 300 FEAAAGNGAA TVYSALASKA MSRHFRCLRD GIVDQIRATK KAMGEKDDQV ALGTTRGETP 360 RLRLLDQTLR QQKAFQQLNM MECHPWRPQR GLPERSVSVL RAWLFEHFLH PYPTDVDKHI 420 LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYMEEAKEEL ENPNTSHNLA SNSDDNSMPA 480 AGNTHFEDEK PTPDQLIRID SDCLSSIINH KTEPPPHHTG PTMHHGGSAS LQLQHPFYSG 540 AIELDFSSYS HGQNLSHAGG VSLTLGLQQH GEAGGVSLAF PSSAAGGSSM FYGGGRESID 600 DCQTMQYASM MDGDQGQNLP YRNLMGAQLL HDMAG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 4e-15 | 392 | 449 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 4e-15 | 392 | 449 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007040323.2 | 0.0 | PREDICTED: homeobox protein BEL1 homolog | ||||
Refseq | XP_007040324.2 | 0.0 | PREDICTED: homeobox protein BEL1 homolog | ||||
Swissprot | Q38897 | 1e-139 | BEL1_ARATH; Homeobox protein BEL1 homolog | ||||
TrEMBL | A0A061G6K4 | 0.0 | A0A061G6K4_THECC; POX family protein isoform 1 | ||||
STRING | EOY24826 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41410.1 | 1e-119 | TALE family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0010s0264.1.p |
Publications ? help Back to Top | |||
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