PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0001s0186.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 677aa MW: 76096.7 Da PI: 6.3167 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.8 | 1.7e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeelv++yL++k++g+k++l +vi+evd+yk+ePwdLp k + +++ ew+fFs+rd+ky++g+r+nratk+gyWkatgk Kalax.0001s0186.1.p 6 LPPGFRFHPTDEELVSYYLNRKINGRKIDL-DVIPEVDLYKCEPWDLPgKsLLPSKDMEWFFFSPRDRKYPNGSRTNRATKAGYWKATGK 94 79****************************.9****************6435566888******************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d++v+s + ++vg+kktLv+y+grap+g++tdWvmheyrl Kalax.0001s0186.1.p 95 DRKVTS-QMREVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 ******.8999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.62E-63 | 3 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.277 | 6 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-29 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 677 aa Download sequence Send to blast |
MSAVSLPPGF RFHPTDEELV SYYLNRKING RKIDLDVIPE VDLYKCEPWD LPGKSLLPSK 60 DMEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS QMREVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECRP SSNGLQDAYA LCRIFKKTAM GPKMDDNNAC SATPSSALIQ 180 GYSSGQEQIQ GHHNNAYASI YHQQHHFDHY YSDNNMGGLA ASSSTSNLER HFAAPSTNDA 240 MDKNWMQFLS EDALDLTNSY PSFPSKVDIA LECARMQHRF SMPPLEVEDL APDDMTTIAT 300 TTTHNNNNSN EVGLLQGILS VAQVQQDIMA ENNNHNECNN MTRAWGGSGS HYSIHDTNDF 360 TFNTNHQAHN NDISSFRSCY NENSSDAADI KCIGITGESE EEQVTDGRMV ENLRWVGMSN 420 KHLEMNLVEE HKVIPLESIS NFQRNNLHQD DPHVGHGYQS DQLSDYTGLD DTEFNSFALS 480 LTNNDSNFFD ESHADEFPNY SAATEGVDKI EVTHGLFIAS HQMANTFFHQ IVPSMTVQVQ 540 LNPAMDNHSY HQVTPKLNTD TTSAHFTSYP VMGHCSALKR TGKSIINVMA ILRVCYSMSK 600 KSAMTHCDVK YPLTSDKCCA LLSKEREESS RCRATTMAKR TGSIQDYMGG SISNRVASRI 660 WACITIAFAL CAFLVV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-59 | 1 | 163 | 15 | 174 | NAC domain-containing protein 19 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-139 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0001s0186.1.p |