PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1319s0001.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 416aa    MW: 46027.2 Da    PI: 6.3225
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1319s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.53.4e-163279250
                  NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50
                         +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp++
  Kaladp1319s0001.1.p 32 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAM 79
                         79***************************.89**************943 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.19E-173195IPR003441NAC domain
PROSITE profilePS5100517.23831186IPR003441NAC domain
PfamPF023651.5E-73374IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MSINKPVNDE QRLVEEQEDR QEAGDRQQEL VMPGFRFHPT EEELVEFYLR RKVEGKRFNV  60
ELITFLDLYR YDPWELPAMA AIVGVEDHPS LPRSLPSNSS MRPSSTSSSR GSGQSSNSER  120
RNHSNNNHQY TAASVERSNA FQAAFGASVG LLSSHQHHHQ HLFIDNNCIT ANDATTDGSS  180
SNTTTTTTDN VTTTLGLAKN NNDNNNAIDP PATANAALSN KGNDSYCFGG TAATVLPSSS  240
SSVLGLLLAE EAHHHHMHHQ AKMNMLMRSP NDNYAEDTSS CIWKTKTQFA GASSSSLMVT  300
NKLYQGSNIN ADDELHRLVL NYHQQQPLNQ QLIQFHSSHY NLDSHHHPTT SQFSNVILPS  360
QSHLLSLNNS LPGTSLNSNT TNPAAAFSDR LWEWNPIISE GNRSEYNSNN NSPFK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-14251208103Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.15e-31NAC domain containing protein 35