PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1256s0001.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family STAT
Protein Properties Length: 666aa    MW: 74038.7 Da    PI: 6.8438
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1256s0001.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT162.11.2e-501762961120
                 STAT   1 ldvvllnalgqp.vekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfei 89 
                          +dvvll+a+g+p ++ d+evvasLlyad+g++ve + daea LL+s+dGvef+s d+ +kl +G+asf lk+sqLsskcdnrLfrikf i
  Kaladp1256s0001.2.p 176 VDVVLLDAFGHPaMSNDIEVVASLLYADNGAPVETPFDAEAALLTSCDGVEFASGDKLIKLQNGHASFNLKMSQLSSKCDNRLFRIKFFI 265
                          69********983579************************************************************************** PP

                 STAT  90 pklkkypfleavskpirCisrsrntrssslt 120
                          p+  +ypf+e++s pir +srsrn+r ++++
  Kaladp1256s0001.2.p 266 PNSGSYPFFETYSPPIRSVSRSRNSRILTRI 296
                          *************************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498998.37E-547128IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555502.02E-9564650IPR000980SH2 domain
Gene3DG3DSA:3.30.505.104.7E-8566650IPR000980SH2 domain
PROSITE profilePS5000110.983568649IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    Send to blast
MTENGKHART RLLRLEGSDM ADRPRSCRIL FLAVLVRINS TPCHPHSTGE QAQYTAGETE  60
YPLGRWVHVG CEVSSGLLLL HIDGNIVIEK LLSSSDSGSG TLKKVFLRGA NDNLVDGYIC  120
NMEILFSTML IKEQYVKEPP HQLSIDFQCT SDVDEDGEGI WNIVGGKPTG RRTFTVDVVL  180
LDAFGHPAMS NDIEVVASLL YADNGAPVET PFDAEAALLT SCDGVEFASG DKLIKLQNGH  240
ASFNLKMSQL SSKCDNRLFR IKFFIPNSGS YPFFETYSPP IRSVSRSRNS RILTRISKKS  300
SSVVHANGSQ SPRTDDVCLK IPQHAAHGAV AFKPTKRVKC LEGKSSMIIQ HHPVRGGSDE  360
EVHSPAKFDS QVTDASRTLT GEPSRLNETD VSQSDSESTE EESLESKGMS GRWKRFTDPC  420
VFKYCLGGLE ERANILKELA LSASDQDLKE FAQKVSMYSG CSHHLTQIAI TKKLIGQGTR  480
FWNMMSQQNE PVCWENVVFE IRKQFMKIAR TTRSLSDQDL SFLRRVSGCQ GYVAQENFEK  540
MWSWLYPVAY TLSRSGINSL WDSTLPNWIE GFITKEEAEL SLQGSRGLQQ PGTFILRFPT  600
SRSWPHPDAG NLVVTYVGSD CTLHHRLISL DHMYSSSGDK NANSLQDMIL SEPELSQLGR  660
VIRSQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023876899.10.0SH2 domain-containing protein B-like
TrEMBLF6H2J60.0F6H2J6_VITVI; Uncharacterized protein
STRINGVIT_19s0014g00140.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-147SH2 domain protein B