PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1256s0001.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family STAT
Protein Properties Length: 701aa    MW: 77936 Da    PI: 6.2983
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1256s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT1621.3e-502113311120
                 STAT   1 ldvvllnalgqp.vekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfei 89 
                          +dvvll+a+g+p ++ d+evvasLlyad+g++ve + daea LL+s+dGvef+s d+ +kl +G+asf lk+sqLsskcdnrLfrikf i
  Kaladp1256s0001.1.p 211 VDVVLLDAFGHPaMSNDIEVVASLLYADNGAPVETPFDAEAALLTSCDGVEFASGDKLIKLQNGHASFNLKMSQLSSKCDNRLFRIKFFI 300
                          69********983579************************************************************************** PP

                 STAT  90 pklkkypfleavskpirCisrsrntrssslt 120
                          p+  +ypf+e++s pir +srsrn+r ++++
  Kaladp1256s0001.1.p 301 PNSGSYPFFETYSPPIRSVSRSRNSRILTRI 331
                          *************************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498995.2E-650163IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555502.49E-9599685IPR000980SH2 domain
Gene3DG3DSA:3.30.505.105.1E-8601685IPR000980SH2 domain
PROSITE profilePS5000110.983603684IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MASTHARDYC ALKDLTWQID PGAAGFCFWL YLSESTPLPA TLIRQVRPDA AIPLLSLDDR  60
KRPLLWPLLF ENEDSPRSSH TASGEQAQYT AGETEYPLGR WVHVGCEVSS GLLLLHIDGN  120
IVIEKLLSSS DSGSGTLKKV FLRGANDNLV DGYICNMEIL FSTMLIKEQY VKEPPHQLSI  180
DFQCTSDVDE DGEGIWNIVG GKPTGRRTFT VDVVLLDAFG HPAMSNDIEV VASLLYADNG  240
APVETPFDAE AALLTSCDGV EFASGDKLIK LQNGHASFNL KMSQLSSKCD NRLFRIKFFI  300
PNSGSYPFFE TYSPPIRSVS RSRNSRILTR ISKKSSSVVH ANGSQSPRTD DVCLKIPQHA  360
AHGAVAFKPT KRVKCLEGKS SMIIQHHPVR GGSDEEVHSP AKFDSQVTDA SRTLTGEPSR  420
LNETDVSQSD SESTEEESLE SKGMSGRWKR FTDPCVFKYC LGGLEERANI LKELALSASD  480
QDLKEFAQKV SMYSGCSHHL TQIAITKKLI GQGTRFWNMM SQQNEPVCWE NVVFEIRKQF  540
MKIARTTRSL SDQDLSFLRR VSGCQGYVAQ ENFEKMWSWL YPVAYTLSRS GINSLWDSTL  600
PNWIEGFITK EEAELSLQGS RGLQQPGTFI LRFPTSRSWP HPDAGNLVVT YVGSDCTLHH  660
RLISLDHMYS SSGDKNANSL QDMILSEPEL SQLGRVIRSQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010644056.10.0PREDICTED: uncharacterized protein LOC100260583 isoform X2
TrEMBLA0A2P5D9360.0A0A2P5D936_PARAD; STAT transcription factor
STRINGXP_008226365.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-165SH2 domain protein B