PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp1201s0015.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 281aa MW: 31100.3 Da PI: 6.6917 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.1 | 6.2e-16 | 200 | 252 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN +L k+l ++++ Kaladp1201s0015.5.p 200 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENCSLTKRLTDISQK 252 689*****************************************998877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-12 | 197 | 254 | No hit | No description |
SMART | SM00338 | 2.0E-16 | 198 | 262 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.369 | 200 | 254 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-14 | 201 | 251 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-11 | 202 | 251 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 205 | 220 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence Send to blast |
MDRVFSMEGM VEQLWTPSQL DSVNASPSSK TKLNRSSSEW AFQLFIQENS TSDHSPAAKQ 60 EEHYDDDDVV EIKDQRAAPL NLPIDSDEYQ AFLKTRLDLA CAAVAMTRAS IGKPQDSSTS 120 TDSGSKASQV HSQLNRKGST FESSKQKNRN EPLGNSSLQA KPGKPVVRVK STTSGSSREL 180 SDDDELEGDT EITGDIDHTD AKRVRRMLSN RESARRSRRR KQAHLTELET QVAQLRVENC 240 SLTKRLTDIS QKFNDAAVDN RVLKADVETL RAKVGQTSSL * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 214 | 221 | RRSRRRKQ |
2 | 216 | 221 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028098786.1 | 6e-83 | light-inducible protein CPRF2-like | ||||
Swissprot | Q99090 | 8e-77 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A2P5DKM0 | 3e-84 | A0A2P5DKM0_PARAD; Basic-leucine zipper transcription factor | ||||
STRING | PGSC0003DMT400050096 | 5e-82 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.3 | 1e-52 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp1201s0015.5.p |
Publications ? help Back to Top | |||
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