PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0746s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 277aa MW: 29439.1 Da PI: 10.3174 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 103.7 | 1.1e-32 | 30 | 84 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprCds+ tkfCyynnysl+qPr++CkaCrr+Wt+GG rnvPvGg+ r+n++ Kaladp0746s0001.1.p 30 EQCPRCDSRSTKFCYYNNYSLTQPRHYCKACRRHWTEGGVCRNVPVGGAIRRNNR 84 68*************************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-17 | 27 | 75 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.748 | 30 | 84 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.7E-28 | 30 | 83 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 32 | 68 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence Send to blast |
MVIMDINLNQ NNNLGADADD QVGHGDQLGE QCPRCDSRST KFCYYNNYSL TQPRHYCKAC 60 RRHWTEGGVC RNVPVGGAIR RNNRGARAGL ARDPLNPVVA PRAPRRRGRG ANAAAVAALA 120 GRSVAMSGRV AGVQSDRGHR RIISSKGTNL LGFLGPNFPS MGTNFQNPTD ARFSVFRRTM 180 SALCPLPLLA TSASAAMNAS NLKLLKEFSA ANKIFLNENV SAGFRNFLCG HNGAIGSGSS 240 DGSGSGEPPA LNDMNVANTH WTDLPDFSPP PPPSFA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07640.1 | 8e-23 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0746s0001.1.p |