PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0099s0063.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 362aa    MW: 39318.7 Da    PI: 4.3919
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0099s0063.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.82.3e-15131497128
                  NAM   7 FhPtdeelvveyLkkkvegkk..leleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                          F+P +ee+v +yLk  + g +    +e+++++vd+y +  Pw++  +++ a+  +  fF+ ++  ++++ r +r +   g+Wk +  ++e
  Kaladp0099s0063.1.p  13 FNPAEEEIVGFYLKLAAMGMPlpPFAESAVRRVDVYGSqAPWEIFvEEL-AR-GSRVFFAITRLVKRSKGRMSRvVGGGGTWKGQSVKRE 100
                          9*******************964223356*******8758****72233.23.355677777777777889999466699********** PP

                  NAM  92 vlskkgelvglkktLvfy..............kgrapkgektdWvmheyrl 128
                          + +  g ++ ++ tL f               +++++k  +t+W m ey++
  Kaladp0099s0063.1.p 101 INV--GDVTAVRYTLSFMketndeqaaassekTKKKKKMASTHWNMVEYKV 149
                          *99..8899*********77777666666554367778889********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.0567170IPR003441NAC domain
PfamPF023654.4E-912148IPR003441NAC domain
SuperFamilySSF1019412.09E-1412170IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MLIAEEWCPE RVFNPAEEEI VGFYLKLAAM GMPLPPFAES AVRRVDVYGS QAPWEIFVEE  60
LARGSRVFFA ITRLVKRSKG RMSRVVGGGG TWKGQSVKRE INVGDVTAVR YTLSFMKETN  120
DEQAAASSEK TKKKKKMAST HWNMVEYKVS SFSGEGDLDQ NVVFCRLTYS GPRHQSSPVP  180
SSASSSAVGG SKRAVDDNDG GLSNNTTEEP IQWSTTAQPA PAALELQEVE NVDWTQINMK  240
SNGEVIGSED DGYLDIINFD VAMDDNDGGL SNNATEEKQQ ENPDHQSTIT IAATISTSQA  300
DGATVGGGAP PAPAALGFQE EVDVDWAQIL KHVGIFRPEV ALDDDVDFSI FDALVQKKQQ  360
Q*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.22e-07NAC domain containing protein 41