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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Kaladp0095s0565.1.p | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family | Nin-like | ||||||||
| Protein Properties | Length: 341aa MW: 38228.4 Da PI: 5.4799 | ||||||||
| Description | Nin-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | RWP-RK | 82.6 | 3.7e-26 | 161 | 210 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
k ++ ++ls+yF++pi+ AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
Kaladp0095s0565.1.p 161 KVLTRKMLSQYFYMPITHAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 210
77999******************************************997 PP
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| Protein Features ? help Back to Top | ||||||
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51519 | 17.484 | 144 | 231 | IPR003035 | RWP-RK domain |
| Pfam | PF02042 | 6.5E-22 | 163 | 210 | IPR003035 | RWP-RK domain |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 341 aa Download sequence Send to blast |
MAAGGWSEFD NVCSEVIAKH ETSFPLSVDF SGFPMVDWDY GLPVQESLLG SLPAMEEGLQ 60 VTDHLSPPMY CHSLVDALPN SYLSQDCQHV PAETKMLTGG YVADNNELGA VVWNNQIQHQ 120 SLSLLQQEDI VVSDENEMRE VDCVGKKRAR KVKDEQFCSS KVLTRKMLSQ YFYMPITHAA 180 KELNVGLTLL KKRCRELGIR RWPHRKLMSL QTLISNVQEL GKQEGDGGKE RLKMAVEELE 240 RERKMMEELP DMQLEDKTKK LRQACFKANY KKRRMMAANG GANNGGSSAQ WSYSFRNGSG 300 SCTTSVCSSF SGINYLEEDD EMRSLLSDCF SSSDSNSLLL * |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
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| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G18790.1 | 1e-47 | RWP-RK domain-containing protein | ||||
| Link Out ? help Back to Top | |
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| Phytozome | Kaladp0095s0565.1.p |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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