PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0534.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 452aa MW: 50789.9 Da PI: 6.6949

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0534.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	65.2	1.1e-20	357	405	2	50
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++++e++s yF+l++++AAk+Lg+++T +K+ CR++ ++RWP+Rkik Kaladp0095s0534.1.p 357 AANLTVEEVSGYFHLTLTKAAKQLGISATFVKKFCRRHRMPRWPYRKIK 405 579*********************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	15.846	340	428	IPR003035	RWP-RK domain
Pfam	PF02042	5.8E-19	359	405	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence Send to blast
MMDPYSSPIP NSTISASTRL QAQSAHSVFY QRSVTVTNYR RLSDKIQNSK NVSATCSVNL 60 TQLPPPLRCY RFRLHPAIDG AFDSVMADHS IDDFVNFDLD QIDIYEFLNS DPPLITQPSN 120 QQEVHEDAIG DTIDPMDDPF VQSLFGTWSN EDASGSETKD MNKGQDDRSF PVSEEFEFWS 180 VPAAPTSCSF CQVLREIVHI NGIYSTKLEI HGRVGMICHA ILVTQISSGE LTHQMLNLSK 240 KSIEGVKEFL VQYCRSKKQA GFVLVSDPMA SFYEALCVGL DLSDNFGYSD DEADPPPGHG 300 CGVTNNHQAY GEAANQTSSS LPRSGPTRKS HQAALKAANQ TSSSDTRTWY QKQRDRAANL 360 TVEEVSGYFH LTLTKAAKQL GISATFVKKF CRRHRMPRWP YRKIKCNESR ISELREVLQR 420 TIYVNQQRQI EAEIARLQRG VEEIYIRFRA S*

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence Send to blast

MMDPYSSPIP NSTISASTRL QAQSAHSVFY QRSVTVTNYR RLSDKIQNSK NVSATCSVNL  60
TQLPPPLRCY RFRLHPAIDG AFDSVMADHS IDDFVNFDLD QIDIYEFLNS DPPLITQPSN  120
QQEVHEDAIG DTIDPMDDPF VQSLFGTWSN EDASGSETKD MNKGQDDRSF PVSEEFEFWS  180
VPAAPTSCSF CQVLREIVHI NGIYSTKLEI HGRVGMICHA ILVTQISSGE LTHQMLNLSK  240
KSIEGVKEFL VQYCRSKKQA GFVLVSDPMA SFYEALCVGL DLSDNFGYSD DEADPPPGHG  300
CGVTNNHQAY GEAANQTSSS LPRSGPTRKS HQAALKAANQ TSSSDTRTWY QKQRDRAANL  360
TVEEVSGYFH LTLTKAAKQL GISATFVKKF CRRHRMPRWP YRKIKCNESR ISELREVLQR  420
TIYVNQQRQI EAEIARLQRG VEEIYIRFRA S*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	9e-12	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Kaladp0095s0534.1.p