PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0211.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 439aa MW: 47218.4 Da PI: 6.8431

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0211.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113	1.3e-35	100	158	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++cprC s++tkfCy+nny +qPryfC++C+ryWt GG++rn+PvG+grrk+k Kaladp0095s0211.1.p 100 PDKIIPCPRCASMDTKFCYFNNYKANQPRYFCRKCQRYWTSGGTMRNLPVGAGRRKSKC 158 7899****************************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-27	93	157	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.8E-29	102	157	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.795	104	158	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	106	142	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence Send to blast
MDDEDQIPEP LSDAPTKLFG PSIAEPSPPP RPSGSEGACD ADVEEGRGCG MESGLDDESD 60 DEGEEENGDL QKTDQQDAAA GTNDGQKSEA GAQEKTLKKP DKIIPCPRCA SMDTKFCYFN 120 NYKANQPRYF CRKCQRYWTS GGTMRNLPVG AGRRKSKCSA PQRQQMEVPR DFQTVSTRGS 180 NGVVAHNGSV PQVSSPKGVE KASRLNGLGK PKELKISSSH ETVVDGSRSG SAGSGSNIEN 240 EGQATARAAR GYQSFQPHML CFPAPLWPPF PWNPAQYNCP LPSPIIYPPG FPVPFYPCVP 300 RAWNVPLSAH PSSPSLQSES KSPTLGKHSR DNIDNAAKPG NTQAGERPKE GNPKPSIWVP 360 KTVRMDDLEE AAKSSMWATL GIKYDNILQS NGKGHLNPFS SLAVETERSR PVSSTSSALL 420 ANPAALSRSM NFHESSST*

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence Send to blast

MDDEDQIPEP LSDAPTKLFG PSIAEPSPPP RPSGSEGACD ADVEEGRGCG MESGLDDESD  60
DEGEEENGDL QKTDQQDAAA GTNDGQKSEA GAQEKTLKKP DKIIPCPRCA SMDTKFCYFN  120
NYKANQPRYF CRKCQRYWTS GGTMRNLPVG AGRRKSKCSA PQRQQMEVPR DFQTVSTRGS  180
NGVVAHNGSV PQVSSPKGVE KASRLNGLGK PKELKISSSH ETVVDGSRSG SAGSGSNIEN  240
EGQATARAAR GYQSFQPHML CFPAPLWPPF PWNPAQYNCP LPSPIIYPPG FPVPFYPCVP  300
RAWNVPLSAH PSSPSLQSES KSPTLGKHSR DNIDNAAKPG NTQAGERPKE GNPKPSIWVP  360
KTVRMDDLEE AAKSSMWATL GIKYDNILQS NGKGHLNPFS SLAVETERSR PVSSTSSALL  420
ANPAALSRSM NFHESSST*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6PA57	3e-96	A0A2R6PA57_ACTCH; Cyclic dof factor like

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	2e-35	cycling DOF factor 2

Link Out ? help Back to Top
Phytozome	Kaladp0095s0211.1.p